Scores and annotations

Remote access

Download and install TABIX. Then retrieve scores and annotations remotely in the command line. For instance for the SNP rs227727 (hg19, chr17:54776955-54776955)

tabix http://pedagogix-tagc.univ-mrs.fr/~gonzalez/tagoos/release/180328/tagoos_intergenic_hg19.bed.gz chr17:54776955-54776955

Output columns are described here

Local access

If you plan to retrieve score often, it is better to download BED.GZ and TBI files here and use TABIX locally. The same example with a local file:

tabix tagoos_intergenic_hg19.bed.gz chr17:54776955-54776955